BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F02SP1|AL426707
(777 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1600 1540 0.0
>3x_Contig1600
Length = 9359
Score = 1540 bits (777), Expect = 0.0
Identities = 777/777 (100%)
Strand = Plus / Minus
Query: 1 gatctttgcttccatttcacttcaccagcggcaatgaattgatcgatgatgacttgagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7957 gatctttgcttccatttcacttcaccagcggcaatgaattgatcgatgatgacttgagca 7898
Query: 61 gtgttggcgaaatcaccgaattgagcttcccaaacaacgaaataatctgggttagtcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7897 gtgttggcgaaatcaccgaattgagcttcccaaacaacgaaataatctgggttagtcaaa 7838
Query: 121 gagtaaccatactcgaaacccatacaaccgtattcagacaacgaagaattacagatggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7837 gagtaaccatactcgaaacccatacaaccgtattcagacaacgaagaattacagatggtg 7778
Query: 181 aagttagcttgtttttcagacaagtgctttaatggagtgtaagtattctcggatttttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7777 aagttagcttgtttttcagacaagtgctttaatggagtgtaagtattctcggatttttgg 7718
Query: 241 tcgtgaagaacagcatgtctttgtgaaaaggtacctctttcaacatcttcaccagaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7717 tcgtgaagaacagcatgtctttgtgaaaaggtacctctttcaacatcttcaccagaaact 7658
Query: 301 ctgacgtgattaccttccaacactaaggaaccgaaagctaatgcttcaccggtagaccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7657 ctgacgtgattaccttccaacactaaggaaccgaaagctaatgcttcaccggtagaccag 7598
Query: 361 tcaataccttcaccggattcaactgctttacctctgttggttaaaattctcttcaagttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7597 tcaataccttcaccggattcaactgctttacctctgttggttaaaattctcttcaagttc 7538
Query: 421 ttatgaacttcgaagttctctggccatgaggagatggtcttaccaatgttcttcaaagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7537 ttatgaacttcgaagttctctggccatgaggagatggtcttaccaatgttcttcaaagta 7478
Query: 481 tcagcatcaacgacggttggttcgtgggataagatttcagtagctaaagcctttggagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7477 tcagcatcaacgacggttggttcgtgggataagatttcagtagctaaagcctttggagac 7418
Query: 541 ttgaaaccttcccaagcagcagttaaccattctcttgaagttggcttatagtcctttgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7417 ttgaaaccttcccaagcagcagttaaccattctcttgaagttggcttatagtcctttgcc 7358
Query: 601 ttctcatatgcttcctcgaatagaccccaaacccatttcttatgttcatcgatatcttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7357 ttctcatatgcttcctcgaatagaccccaaacccatttcttatgttcatcgatatcttgc 7298
Query: 661 ttggtgaaggaaccttcagataccaacttttccgtgtaaacgtcaatgacagatttttgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7297 ttggtgaaggaaccttcagataccaacttttccgtgtaaacgtcaatgacagatttttgc 7238
Query: 721 ttagaaatcttttggtacattaatggttgtgtgaaggaaggttggtcagtttcatta 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7237 ttagaaatcttttggtacattaatggttgtgtgaaggaaggttggtcagtttcatta 7181
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5900
Number of Sequences: 1807
Number of extensions: 5900
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 777
length of database: 10,358,551
effective HSP length: 16
effective length of query: 761
effective length of database: 10,329,639
effective search space: 7860855279
effective search space used: 7860855279
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)